/******************************************************************************
	This file is a part of the Snapshot Bioinformatics Project

	Copyright (C) 2012-2013 Jarom Schow

	This program is free software: you can redistribute it and/or modify
	it under the terms of the GNU General Public License as published by
	the Free Software Foundation, either version 3 of the License, or
	(at your option) any later version.

	This program is distributed in the hope that it will be useful,
	but WITHOUT ANY WARRANTY; without even the implied warranty of
	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
	GNU General Public License for more details.

	You should have received a copy of the GNU General Public License
	along with this program.  If not, see <http://www.gnu.org/licenses/>.
******************************************************************************/
#ifndef SEQ_FEATURE_H
#define SEQ_FEATURE_H

#include "BioDefs.h"

#include <QtCore/QString>
#include <QtCore/QMap>

#include "SeqRange.h"

namespace Bio {

class BIO_EXPORT SeqFeature {
public:
	SeqFeature();
	SeqFeature( const QString &type );
	virtual ~SeqFeature();

	int		getSeqFeatureId() const;
	void	setSeqFeatureId( int id );

	QString	getType() const;
	void	setType( const QString &type );

	SeqRange	getLocation() const;
	void		setLocation( const SeqRange &range );
	
	QString	getQualifier( const QString &key ) const;
	void	setQualifier( const QString &key, const QString &value );

	QMapIterator<QString, QString>	getQualifierIterator() const;

private:
	
	int						m_featureId;
	QString					m_type;
	SeqRange				m_location;
	QMap<QString, QString>	m_qualifiers;
};

}; // Bio

#endif // SEQ_FEATURE_H